Applied Environmental Metabolomics PDF Download Free

Applied Environmental Metabolomics PDF

Attributes of Applied Environmental Metabolomics PDF

Applied Environmental Metabolomics PDF Community Insights and Guidance from the Field brings together contributions from global experts who have helped to define and develop the exciting and rapid advances that are taking place in the field of environmental metabolomics. This book is aimed at expert users, students, researchers, and academics in metabolomics and systems biology. It not only demonstrates the best practice in experimental design but also provides insight into state-of-the-art instrumentation and the depth of analysis one can expect to get by using various sampling, chromatographic, mass spectrometric, and nuclear magnetic resonance (NMR) techniques. Common experimental and technical pitfalls are also highlighted. This book provides a unique insight into the world of environmental metabolomics and will help the practicing scientist avoid repeating similar costly mistakes, steering them efficiently toward the generation of high-quality data and high-impact publications.

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Applied Environmental Metabolomics PDF

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Illustrations of Applied Environmental Metabolomics PDF

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Contents of the Textbook

  • Title page
  • Table of Contents
  • Copyright
  • Contributors
  • Foreword
  • Part 1: Introduction
  • Chapter 1: Applied environmental metabolomics: Eliciting viewpoints from the metabolomics research community
  • Abstract
  • Introduction
  • Reports from the field
  • The future
  • References
  • Part 2: Reports from the field
  • Chapter 2: Measuring root exudate metabolites in holm oak (Quercus ilex) under drought and recovery
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • Summary and future perspectives
  • References
  • Chapter 3: Visualization of cyanogenic glycosides in floral tissues
  • Abstract
  • Acknowledgments
  • Scope
  • Aims and objectives of the study
  • Introduction
  • Approach (material and methods)
  • Sampling protocol
  • Analytical protocol
  • MALDI mass spectrometry imaging
  • Main findings
  • Quantification of floral cyanogenic glycoside concentrations
  • Identification of cyanogenic glycosides
  • Detection of cyanogenic glycosides in Proteaceae flowers using MALDI-MSI
  • What went right
  • What went wrong
  • Suggestions for improvements for future studies
  • Final remarks
  • References
  • Chapter 4: Environmental assessment of metal impacted soils using community metabolic profiling
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • Discussion
  • Final thoughts
  • References
  • Chapter 5: Decoding the metabolic landscape of maize responses to experimentally controlled drought stress: A greenhouse case study
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (material and methods)
  • Main findings
  • Concluding remarks—“What went right” and “what went wrong”
  • References
  • Chapter 6: Nontargeted screening of metabolites to discriminate disease suppressive and nonsuppressive soils for the fungal pathogen Rhizoctonia solani AG8
  • Abstract
  • Scope
  • Aims
  • Introduction
  • Approach
  • Main findings
  • Recommendations for agricultural field studies
  • Final remarks
  • References
  • Chapter 7: Ecosystem metabolomics of dissolved organic matter from arctic soil pore water across seasonal transitions
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach
  • Main findings
  • Conclusion
  • References
  • Chapter 8: Temporal trends in metabolite profiles correspond with seasonal patterns of temperature and rainfall during field-scale ecotoxicology assessment
  • Abstract
  • Scope
  • Aims and objectives of the study
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • What went right?
  • What would you recommend to other researchers wanting to do similar research?
  • What could be improved?
  • Final thoughts
  • References
  • Chapter 9: Metabolic responses of eelgrass (Zostera marina) to artificially induced stresses
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (material and methods)
  • Biological samples
  • Environment sampled
  • Sampling protocol
  • Herbicide exposure
  • Low light (dark) and high temperature
  • Growth, photosynthetic efficiency
  • Analytical protocol
  • Main findings
  • What went right
  • What went wrong
  • Summary and future perspectives
  • References
  • Chapter 10: Metabolomic profiling of anthropogenically threatened Australian seagrass Zostera muelleri using one- and two-dimensional gas chromatography
  • Abstract
  • Acknowledgment
  • Scope
  • Aims and objectives
  • Introduction
  • Experimental methods
  • Sample preparation
  • Metabolite profiling
  • Data preprocess and analysis
  • Main findings
  • What went wrong in seagrass metabolomics
  • What went right in seagrass metabolomics
  • Summary and future perspectives
  • References
  • Chapter 11: The metabolic response of marine copepods (Calanus spp.) to food deprivation, end-of-century ocean acidification, and global warming scenarios
  • Abstract
  • Acknowledgments
  • Scope
  • Aims and objectives of the study
  • Introduction
  • Approach (material and methods)
  • Biological sample
  • Environment sampled
  • Sampling protocol
  • Analytical protocol
  • Main findings
  • What went right?
  • What went wrong?
  • Summary and future perspectives
  • References
  • Further reading
  • Chapter 12: Untargeted screening of xenobiotics and metabolic profiles of green sea turtles on the Great Barrier Reef
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (material and methods)
  • Suggestions for future studies
  • Summary and future perspectives
  • References
  • Chapter 13: Butterflyfish gill mucus metabolome reflects diet preferences and gill parasite intensities
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • What went right
  • What went wrong
  • Summary and future perspectives
  • References
  • Chapter 14: Exploring the coral bleaching tipping point with 13C metabolomics
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (material and methods)
  • Main findings
  • What went well
  • What went wrong
  • What data did you wish you had but did not?
  • Summary and future perspectives
  • References
  • Chapter 15: The metabolic significance of symbiont community composition in the coral-algal symbiosis
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • What went right?
  • What went wrong?
  • Summary and future perspectives
  • References
  • Chapter 16: Evaluating the effects of environmental perturbations in bloom forming cyanobacteria through untargeted metabolomics
  • Abstract
  • Acknowledgments
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Extraction and analytical protocols
  • Main findings
  • What went right
  • What went wrong
  • Suggestions and final remarks
  • References
  • Chapter 17: Metabolomics investigation into summer mortality events of Greenshell mussels (Perna canaliculus) in New Zealand
  • Abstract
  • Scope
  • Aim and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • Summary and future perspectives
  • References
  • Chapter 18: Metabolic responses of the water flea (Daphnia magna) to individual contaminants and mixtures in presence of dissolved organic matter
  • Abstract
  • Scope
  • Aims and objectives of the studies
  • Introduction
  • Approach
  • Daphnia culturing and maintenance
  • Sublethal exposure to contaminants
  • Metabolite extraction
  • 1H NMR data acquisition
  • Data processing and statistical analysis
  • Main findings
  • What went right
  • What went wrong
  • Suggestions for future studies
  • Conclusion
  • References
  • Chapter 19: NMR-based metabolomics of dragonfly nymphs exposed to multiple stressors: An approach for field assessments to diagnose effects
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • What went right?
  • What went wrong?
  • Summary and future perspectives
  • Final remarks
  • References
  • Chapter 20: Using laboratory-cultured nonbiting midge larvae (Chironomus tepperi) to identify early metabolic changes following exposure to zinc
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • What worked
  • What did not work
  • Future studies
  • Summary
  • References
  • Chapter 21: Using field-collected estuarine worms to identify early metabolic changes following exposure to zinc
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach
  • Main findings
  • What worked
  • What didn’t work
  • Future perspectives
  • Summary
  • References
  • Chapter 22: Metabolomic signatures of Naegleria fowleri colonization in drinking water distribution systems in rural Western Australia
  • Abstract
  • Scope
  • Aim and objectives of the study
  • Introduction
  • Approach (materials and methods)
  • Summary of project outcomes and primary finding
  • What went wrong?
  • What went right?
  • Concluding remarks
  • References
  • Chapter 23: Establishing a regional microbial blueprint of metabolic function in sediment collected from pristine tropical estuarine systems
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (material and methods)
  • Analytical protocol
  • Main findings
  • Concluding remarks
  • References
  • Chapter 24: Acute sublethal exposure to a neonicotinoid pesticide triggers a short-term metabolic response in honey bee larvae
  • Abstract
  • Scope
  • Aims and objectives
  • Introduction
  • Approach (materials and methods)
  • Main findings
  • Concluding comments
  • References
  • Part 3: Future perspectives
  • Chapter 25: Community insights and guidance from the field
  • Abstract
  • Introduction
  • Case study contributions
  • Community insights
  • Conclusions and final remarks
  • References
  • Chapter 26: The future of environmental metabolomics
  • Abstract
  • Introduction
  • Risk assessment and metabolomics
  • Flux analysis
  • Community metabolomics
  • Technological development
  • Systems toxicology
  • Summary
  • References

The Writers

David BEALE | Senior Research Scientist | PhD | The Commonwealth Scientific  and Industrial Research Organisation, Canberra | CSIRO | Land and Water

Dr David J. Beale is a Senior Research Scientist at the CSIRO, delivering research outcomes and creating impact in the area of environmental metabolomics and analytical chemistry. David couples high-throughput next-generation tools with environmental monitoring techniques for detecting, quantifying and tracking contaminants in the environment and assessing their biological impact using omics-based approaches. David is the current vice president of the Australian and New Zealand Metabolomics Network.

Proportions of Applied Environmental Metabolomics PDF

  • No. of pages: 446
  • Language: English
  • Copyright: © Academic Press 2022
  • Published: June 9, 2022
  • Imprint: Academic Press
  • Paperback ISBN: 9780128164600
  • eBook ISBN: 9780128164617

None of the books or software is hosted on our website. These are only links to external sources.

Source: Elsevier

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